CDS

Accession Number TCMCG057C36004
gbkey CDS
Protein Id XP_018440170.1
Location complement(join(43119524..43119667,43119768..43119842,43119929..43120048,43120155..43120208,43120281..43120491,43120622..43120698,43120788..43120994,43121076..43121159,43121587..43121700,43121791..43121836,43121914..43122011,43122092..43122214,43122451..43122543,43122636..43122692,43122787..43122859,43122949..43123067,43123455..43123544,43123626..43123940,43124017..43124136,43124334..43124447,43124520..43124696,43124850..43124964,43125064..43125227,43125460..43125645,43125765..43125855,43126028..43126092,43126192..43126266,43126354..43126437,43126523..43126693,43126786..43127913))
Gene LOC108812415
GeneID 108812415
Organism Raphanus sativus

Protein

Length 1529aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018584668.1
Definition PREDICTED: DNA polymerase alpha catalytic subunit isoform X1 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category L
Description DNA polymerase
KEGG_TC -
KEGG_Module M00261        [VIEW IN KEGG]
KEGG_Reaction R00375        [VIEW IN KEGG]
R00376        [VIEW IN KEGG]
R00377        [VIEW IN KEGG]
R00378        [VIEW IN KEGG]
KEGG_rclass RC02795        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03032        [VIEW IN KEGG]
KEGG_ko ko:K02320        [VIEW IN KEGG]
EC 2.7.7.7        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00230        [VIEW IN KEGG]
ko00240        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko03030        [VIEW IN KEGG]
map00230        [VIEW IN KEGG]
map00240        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map03030        [VIEW IN KEGG]
GOs GO:0000228        [VIEW IN EMBL-EBI]
GO:0000428        [VIEW IN EMBL-EBI]
GO:0000726        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0003887        [VIEW IN EMBL-EBI]
GO:0003896        [VIEW IN EMBL-EBI]
GO:0003899        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005657        [VIEW IN EMBL-EBI]
GO:0005658        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006260        [VIEW IN EMBL-EBI]
GO:0006261        [VIEW IN EMBL-EBI]
GO:0006269        [VIEW IN EMBL-EBI]
GO:0006270        [VIEW IN EMBL-EBI]
GO:0006271        [VIEW IN EMBL-EBI]
GO:0006272        [VIEW IN EMBL-EBI]
GO:0006273        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006302        [VIEW IN EMBL-EBI]
GO:0006303        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016772        [VIEW IN EMBL-EBI]
GO:0016779        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0022616        [VIEW IN EMBL-EBI]
GO:0030880        [VIEW IN EMBL-EBI]
GO:0030894        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032774        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0032993        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034061        [VIEW IN EMBL-EBI]
GO:0034062        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034654        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043596        [VIEW IN EMBL-EBI]
GO:0043601        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044427        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044454        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0055029        [VIEW IN EMBL-EBI]
GO:0061695        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071897        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097747        [VIEW IN EMBL-EBI]
GO:0140097        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1990234        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCCGGCGATAATTCGACGGAGGGTGGCCGAAAGCGAAGCAGAGGCGCGGAGGCATCGACTCGGAAGGAAGCCCTAGAGCGGCTGAAAGCGATCCGGGAAGGAGGACGTCGGAATCTATCAGCAGCTTCAGGCGGTGGCTACGACATCAGGATAGAAGAACCGATCTTCGACACCGTAGACGACGACGAGTACGAATCGATCGTGTCCCGACGGCGCGAGGAGGCTCGCGGATTCGTAGTCGACGACGGGGAGGACGGGGATCTGGGATACGGCGACGAAGGCGAGGAGGAGGATTTCACGAAGCCCAGTGGGCCTGATTCGACGGATGAATCGGACGACGGTGGTGGTGGATTTAGCGGGAGGCTGAGGAAGAAGAAAGGTGAGAAGAAGAAGGCGAAAGAACAGCAGCCTCAGGTGAAGAAGGTGAATCCGGCGCTTAAGGCTGCGGCTACTATTACAGGTGAAGGGAGGCTTTCTTCGATGTTCACGTCTTCGAGTTTTAAGAAGGGGAAAGAGACTGATAAGGTGAAATGCGAGGGTATTCTTGATGAGGTTTTAGCTGAGGTGACTCCTGATGATTTGGATAGAGAAAGGCATAGGAGAAGGAAACAACCATCTACTACAGTTCCGATTACTTTCTCTAGGAACAAAAATGTGGTTTCTGTTACCTCGAGCGTGCCTATGCAGGTTTTAGAACCCACAAGTGATCGTGTTTTCATGGAGAAGGAGTTGATGAAAGAGCTGAAAGAAGAAGCTGTGACAGAATCTGAAGTCACTCCTCAGGGTGATTCTGAGAAGATGGAGTTACCTGGGAGTGGTGGTGTTATAGAGGATGGATCAAATGATGTGAGACAAAGTGAAGCGAAGGCTGAGTCAGAAGTTAAGGAGGTGTATACATTGAATGCGACAGTTGATACGAAAGAGAAGGATTCGGCTCTAAGCGCCACTGCTGGTTGGAAAGAAGCGATGGGTAAAGGTGGAACTGATGGGGCTTCACTTAGTTCTAACTCTGAAGGGCAGTCGGAATTTGATTTGGATGCTGATGGTTCACTTCGTTTTTACATTCTTGACGCTTACGAGGAGGCCTTTGGGGCGAGTATGGGCACAATATATTTGTTTGGGAAGGTTAAGATGGGAGACACGTACAAGAGTTGCTCTGTGGTAGTTAAGAATATCCAGAGATGTGTTTATGCTATCCCCAATGATTCCGTATTTCCTTCCCATGAATTAATCACGCTCGAGCAAGAGGTGAAAGACTCGAAACTTTCTCCTGAATCCTTCCGGGGGAAGTTACATGAAATGGCATCAAATTTGAAGAAAGAAGTTTCTCAGCAATTGTTACAACTCAATGTTTCAAGTTATAGCATGGCACTTGTCAAGAGAAACTATGCATTTGAGAGGCCTGATGTGCCTGTTGGCGAACAATATGTCTTGAAGATAAATTATCCATTTAAGGATCCTCCACTTCCAGAAGACCTTAAAGGGGAGTCTTTTAGCGCTGTCCTTGGCTCTCACACCAGTGCTTTGGAGCTTTTTATCCTTAAAAGGAAGATCATGGGACCGTCTTGGCTCAAAATTTCAAAATTTTCTACCAATTCACCCTCTCAACGAGTGAGCTGGTGTAAGTTTGAGGTTACTGTTGAGTCTCCCAAGGTTATCACTGTTTTAGTTTCGGAGGAAAAAATTGTTCATCCTCCTGCTGTAGTTACAGCCATAAATTTAAAGACTATAGTCAATGAAAAGCAGAACATCAGCGAAATTGTTTCTGCGTCTGTTCTCTGCTTTCACAACGCCAAGATTGATGTTCCAATGCCAGGTCCAGAAAGAAAGAGGTCTGGTATTCTGAGTCATTTCACTGTTGTTAGGAATCCTGAAGGAACCGGTTACCCAATTGGTTGGAAAAAAGAAGTGGCGGACAGAAATTCAAAGAACGGCTGCAGTGTTTTAAGTTTTGAAAATAGTGAAAGAGCATTGCTGAATCGACTGTTTCTGGAGCTGAACAAATTGGACAGTGATGTTCTTGTGGGTCATAATATATCAGGTTTTGATCTGGATGTCCTTCTCCAAAGAGCCCAGGCTTGCAAAGTTTTGAGTAGCATGTGGTCCAAAATTGGCCGTCTCAAACGCTCTTCCATGCCTAAGCTTAAAGGGTACACTAATTCTGGGTCCGGTGCTACACCAGGGCTCATGTCTTGCATTGCTGGAAGACTCTTGTGTGATACAGATCTATGTTCTCGTGATTTGTTGAATCAGGTCAGTTATTCGTTAACAGATCTTTCAAAGACACAGCTAAACCGGGACAGGAAAGAGATACCGCCGAATGACATTCCCAAAATGTTTCAGTCATCTAAAACACTTGTGGAACTTATTGAGTGTGGTGAGACAGATGCGTGGTTAGCCATGGAGCTCATGTTTCATCTAAGTGTTCTTCCACTCACACTACAGCTAACTAACATAAGTGGCAATCTTTGGGGAAAAACTCTTCAGGGAGCCAGGGCGCAAAGAATTGAATACTACTTACTACATACATTCTACTCAAAGAAGTACATCCTCCCAGACAAACTTTCACAACGTATGAAGGAAATAAAGTCATCAAAAAGAAGAATGAATCACGGTCCGGAGGACCACAATGTTGATGAATTGGATGCTGACCTGGCTTTGGAAAATGATCCGTCTAAGGGCAACAAAACAAAGAAAGGTCCAGCCTACGCTGGTGGACTGGTCTTGGAGCCAAAGAAAGGCTTCTATGACAAATATGTTTTGCTTCTTGATTTCAATAGTCTTTACCCGTCTATTATACAGGAATATAATATCTGTTTCACGACCATACCACGATCAGAAGACGGAGTTCCTCGTTTACCGTCGAGTCAGACACCTGGAATTCTTCCAAAGCTGATGGAACATTTGGTCAGTATAAGGAAAAGCGTCAAACTAAAGATGGCAAAGGAAACAGGTCTCAAGTACTGGGAGCTTGACATTAGGCAGCAGGCATTAAAGCTCACAGCCAATAGTATGTATGGTTGTCTGGGGTTTTCCAATTCAAGATTCTACGCTAAGCCTTTAGCAGAGCTCATTACGCTGCAGGGAAGGGAGATCCTGCAAAGAACCGTGGATCTTGTCCAGAATCATTTAAACCTAGAGGTGATTTATGGTGACACAGATTCAATCATGATTCACAGTGGACTAGATGATATCGAAGAGGTGAAAGCCATAAAAACAAAAGTCATCCAAGAGGTCAATAAGAAGTATAGATGTCTGAAAATTGACTGTGATGGCATATATAAGAGGATGCTTCTTCTTAGAAAAAAGAAATATGCTGCCGTCAAGTTGCAGATCAAGGACGGGAAGATTTACGAGGAAATTGAAAGAAAAGGTGTGGACATGGTTCGTCGAGATTGGAGCTTACTTTCCAAGGAAATTGGAGATTTATGCTTGGCTAAGATCTTGCATGGAGGGCCATGTGATGATGTCGTTGAAGCAATTCATAACGAGCTTATGAAGATAAAAGAGGAAATGAGAAATGGGCAAGTTGCACTTGAGAAGTATGTCATCACCAAGGCATTGACTAAGTCACCAGAAGCTTATCCAGATTCCAAAAGCCAACCACACGTTCAAGTCGCTCTCAGAATGAGGCAACATGGTTATAAAGAAGGTTTCAATGCTAAGGACACTGTACCATATATAATCTGCTATGAACAGGGTAATACTAGCTCTGCTAGCTCAGCAGGGATTGCCGAACGTGCTAGGCATCCTGATGAGGTGAAATCAAAAGACAGCAAATGGTTGGTTGACATAGATTACTACTTGGCACAACAGATTCATCCTGTGGTGTCTCGTTTATGCGCAGAGATTCAGGGCACAAGTCCTGAGAGGTTAGCCGAGTGTTTAGGACTTGACCCATCAAAGTATCGAAGCAGATCAAACGATGCTACTGGCAGTGATCCTTCTACATCACTCTTGTTTGCTACAAGCGATGAAGAAAGATACAAAAGCTGCGAGCCTTTAGCATTAGCATGCCCCAGCTGCTCTGCTGCTTTCAACTGTCCATCTATTATTAGCTCAGTTTGTGCCTCGATCAGTAAGAAATCTGAAACAGAGGAATCTGATTCTACATTCTGGCTTAAGCTGCAATGCCCGAAATGTGAGCCAGGTGGTAACACGGGAAGAATATCCCCTGCAATGATATCTAACCAGGTGAAAAGGCAGATCGATGGGTTTGTGTCAATGTACTACAAAGGCATAATGATGTGTGACGATGAGTCTTGCAAGCACACGACTCGCACCCCCAACTTCCGTCTGCTTGGTGACCGTGAACGAGGAACAGTTTGTCCAAACTATCCTAATTGTAATGGAACCCTCTTAAGAAAGTACACTGAAGCAGACTTGTACAAGCAGCTGTCATACTTCTGCCACATATTAGACACACAATGCACTCTAGAAAAGCAGATAGATGTTGGTGTCAGAATTCAAGTAGAGAAAGCAATGACGAAGATAAGACCTGCGGTCCAGTCAGCAGCATCCATGGCTCGAAGTATCCGAGACCGGTGTGCATACGGATGGCTGCAACTCACAGACATAGCCATTTGA
Protein:  
MSGDNSTEGGRKRSRGAEASTRKEALERLKAIREGGRRNLSAASGGGYDIRIEEPIFDTVDDDEYESIVSRRREEARGFVVDDGEDGDLGYGDEGEEEDFTKPSGPDSTDESDDGGGGFSGRLRKKKGEKKKAKEQQPQVKKVNPALKAAATITGEGRLSSMFTSSSFKKGKETDKVKCEGILDEVLAEVTPDDLDRERHRRRKQPSTTVPITFSRNKNVVSVTSSVPMQVLEPTSDRVFMEKELMKELKEEAVTESEVTPQGDSEKMELPGSGGVIEDGSNDVRQSEAKAESEVKEVYTLNATVDTKEKDSALSATAGWKEAMGKGGTDGASLSSNSEGQSEFDLDADGSLRFYILDAYEEAFGASMGTIYLFGKVKMGDTYKSCSVVVKNIQRCVYAIPNDSVFPSHELITLEQEVKDSKLSPESFRGKLHEMASNLKKEVSQQLLQLNVSSYSMALVKRNYAFERPDVPVGEQYVLKINYPFKDPPLPEDLKGESFSAVLGSHTSALELFILKRKIMGPSWLKISKFSTNSPSQRVSWCKFEVTVESPKVITVLVSEEKIVHPPAVVTAINLKTIVNEKQNISEIVSASVLCFHNAKIDVPMPGPERKRSGILSHFTVVRNPEGTGYPIGWKKEVADRNSKNGCSVLSFENSERALLNRLFLELNKLDSDVLVGHNISGFDLDVLLQRAQACKVLSSMWSKIGRLKRSSMPKLKGYTNSGSGATPGLMSCIAGRLLCDTDLCSRDLLNQVSYSLTDLSKTQLNRDRKEIPPNDIPKMFQSSKTLVELIECGETDAWLAMELMFHLSVLPLTLQLTNISGNLWGKTLQGARAQRIEYYLLHTFYSKKYILPDKLSQRMKEIKSSKRRMNHGPEDHNVDELDADLALENDPSKGNKTKKGPAYAGGLVLEPKKGFYDKYVLLLDFNSLYPSIIQEYNICFTTIPRSEDGVPRLPSSQTPGILPKLMEHLVSIRKSVKLKMAKETGLKYWELDIRQQALKLTANSMYGCLGFSNSRFYAKPLAELITLQGREILQRTVDLVQNHLNLEVIYGDTDSIMIHSGLDDIEEVKAIKTKVIQEVNKKYRCLKIDCDGIYKRMLLLRKKKYAAVKLQIKDGKIYEEIERKGVDMVRRDWSLLSKEIGDLCLAKILHGGPCDDVVEAIHNELMKIKEEMRNGQVALEKYVITKALTKSPEAYPDSKSQPHVQVALRMRQHGYKEGFNAKDTVPYIICYEQGNTSSASSAGIAERARHPDEVKSKDSKWLVDIDYYLAQQIHPVVSRLCAEIQGTSPERLAECLGLDPSKYRSRSNDATGSDPSTSLLFATSDEERYKSCEPLALACPSCSAAFNCPSIISSVCASISKKSETEESDSTFWLKLQCPKCEPGGNTGRISPAMISNQVKRQIDGFVSMYYKGIMMCDDESCKHTTRTPNFRLLGDRERGTVCPNYPNCNGTLLRKYTEADLYKQLSYFCHILDTQCTLEKQIDVGVRIQVEKAMTKIRPAVQSAASMARSIRDRCAYGWLQLTDIAI